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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796367.1_cds_XP_016448954.1_4283
CDS Infomation

[gene=LOC107774020] [db_xref=GeneID:107774020] [protein=cystathionine gamma-synthase 1, chloroplastic-like isoform X1] [protein_id=XP_016448954.1] [location=join(14413..14881,14992..15095,15357..15430,15541..15709,16905..16964,17056..17259,17350..17436,17651..17758,18709..18804,18904..19022,19308..19431)] [gbkey=CDS]
Sequence

ATGGCTGTCTCAAGCTGTGCTAGGGCTTTTCCATCCTTTGAATGCCGTTCGGATGCCGAA
TTCTCTGGCGGTATTCCCCGCCACGACATTCCTAACTCCGGCAAGGCCAGCATTTTGAGT
CACGGATCGTCCATTCACGGTCTGTCTTCTCTTATTTATAGGTTTCCTCCGAACTTTGTT
AGGCAGTTGAGCATTAAGGCTCGGAGGAACTGCAGCAACATCGGTGTGGCTCAAGTTGTG
GCGGCTTCGTGGTCTAACAATAACTCATCTCCTGATTTCACTCCGGTGGCTAAGGCCGTC
GATGCCGCCGCCGCTTCCATTGCTCCTGTTGATACCACGGTAGTTAATGATGACGTGGCG
CTGGTGGAAAATGAGACTTGTAATGATCAAAATGTACAGTTTGACAGTTTGCCAAGTGTG
AGATACGCTTCGTTTTTGAATTCTGATGGGAGTGTCGCTATTCATGCCGGTGAAAGGTTG
GGACGCGGCATTGTTACGGATGCAATTACTACCCCAGTAGTTAACACATCTGCTTATTTC
TTCAACAAGACTTCTGAGCTCATTGATTTTAAGGAGAAAAGACGTGCAAGTTTTGAATAT
GGGCGCTATGGGAACCCAACTACTGTTGTTTTAGAGGAGAAGATAAGCGCACTGGAGGGT
GCTGAATCAACCTTGTTAATGGCATCTGGAATGTGCGCCAGTACTGTAATGCTGTTGGCG
CTGGTTCCTGCTGGAGGCCATATTGTTACAACCACAGACTGCTATAGGAAGACCCGGATC
TTTATTGAAACTATACTTCCTAAAATGGGGATTACGGCCACGGTCATTGACCCAGCCGAT
GTCGGAGCTCTGGAGTTGGCTCTAAATCAGAAGAAAGTGAATCTTTTCTTTACCGAGTCT
CCAACAAATCCATTCCTCAGATGTGTAGACATTGAGCTGGTTTCAAAGCTTTGTCATGAA
AAAGGAGCCTTGGTTTGCATAGATGGGACGTTTGCAACTCCTCTTAATCAAAAGGCCCTT
GCCCTTGGGGCTGACCTCGTTCTGCACTCTGCAACAAAATTCCTTGGTGGGCATAATGAT
GTTCTCGCAGGTTGCATTAGTGGTCCTGTAAAGTTAGTTTCAGTAATACGTAACCTGCAT
CACATCCTGGGTGGTGCTCTCAATCCGAATGCCGCATATCTGATCATCCGAGGCATGAAG
ACGCTGCATCTTCGTTTACAGCAACAAAACTCAACTGCATTGAGGATGGCCGAGATTTTA
GAGGCTCATCCCAAGGTGAGACATGTCTATTATCCAGGCCTGCAAAGTCATCCAGAACAT
CACATTGCAAAGAAACAAATGACAGGTTTTGGTGGTGTGGTCAGTTTTGAGGTTGACGGA
GACCTGCTGACTACCGCAAAATTTGTGGATGCTCTAAAAATTCCGTATATTGCTCCATCA
TTTGGAGGTTGTGAGAGCATTGTGGACCAACCAGCAATAATGTCTTACTGGGATCTTAGC
CAGTCAGATAGAGCCAAGTATGGCATCATGGACAATTTGGTTAGGTTCAGCTTTGGTGTG
GAAGATTTTGATGACTTGAAAGCTGATATTCTTCAGGCTTTGGACTCAATATAG

Peptide Sequence

PEP ID

XP_016448954.1
PEP Infomation

PREDICTED: cystathionine gamma-synthase 1, chloroplastic-like isoform X1 [Nicotiana tabacum]
Sequence

MAVSSCARAFPSFECRSDAEFSGGIPRHDIPNSGKASILSHGSSIHGLSSLIYRFPPNFV
RQLSIKARRNCSNIGVAQVVAASWSNNNSSPDFTPVAKAVDAAAASIAPVDTTVVNDDVA
LVENETCNDQNVQFDSLPSVRYASFLNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYF
FNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTLLMASGMCASTVMLLA
LVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTES
PTNPFLRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHND
VLAGCISGPVKLVSVIRNLHHILGGALNPNAAYLIIRGMKTLHLRLQQQNSTALRMAEIL
EAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGVVSFEVDGDLLTTAKFVDALKIPYIAPS
FGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDSI

Transcript Sequence

Gene sequence data has not been registered.